hrcak mascot   Srce   HID

Original scientific paper
https://doi.org/10.5562/cca2338

On Map Representations of DNA

Milan Randić ; Laboratory for Chemometrics, National Institute of Chemistry, Hajdrihova 19, Ljubljana, Slovenia
Boris Horvat ; Institute of Mathematics, Physics and Mechanics, University of Ljubljana, Slovenia; University of Primorska, Koper, Slovenia; Abelium, d.o.o. Ljubljana, Slovenia
Gašper Jaklič ; Institute of Mathematics, Physics and Mechanics, University of Ljubljana, Slovenia
Dejan Plavšić ; NMR Center, Institute Rudjer Bošković, Bijenička cesta 54, Zagreb, Croatia
Tomaž Pisanski ; Institute of Mathematics, Physics and Mechanics, University of Ljubljana, Slovenia; University of Primorska, Koper, Slovenia

Fulltext: english, pdf (3 MB) pages 519-529 downloads: 621* cite
APA 6th Edition
Randić, M., Horvat, B., Jaklič, G., Plavšić, D. & Pisanski, T. (2013). On Map Representations of DNA. Croatica Chemica Acta, 86 (4), 519-529. https://doi.org/10.5562/cca2338
MLA 8th Edition
Randić, Milan, et al. "On Map Representations of DNA." Croatica Chemica Acta, vol. 86, no. 4, 2013, pp. 519-529. https://doi.org/10.5562/cca2338. Accessed 18 Sep. 2021.
Chicago 17th Edition
Randić, Milan, Boris Horvat, Gašper Jaklič, Dejan Plavšić and Tomaž Pisanski. "On Map Representations of DNA." Croatica Chemica Acta 86, no. 4 (2013): 519-529. https://doi.org/10.5562/cca2338
Harvard
Randić, M., et al. (2013). 'On Map Representations of DNA', Croatica Chemica Acta, 86(4), pp. 519-529. https://doi.org/10.5562/cca2338
Vancouver
Randić M, Horvat B, Jaklič G, Plavšić D, Pisanski T. On Map Representations of DNA. Croatica Chemica Acta [Internet]. 2013 [cited 2021 September 18];86(4):519-529. https://doi.org/10.5562/cca2338
IEEE
M. Randić, B. Horvat, G. Jaklič, D. Plavšić and T. Pisanski, "On Map Representations of DNA", Croatica Chemica Acta, vol.86, no. 4, pp. 519-529, 2013. [Online]. https://doi.org/10.5562/cca2338

Abstracts
We have constructed graphical (qualitative and visual) representations of DNA sequences as 2D
maps and their numerical (quantitative and computational) analysis. The maps are obtained by transforming
the four-letter sequences (where letters represent the four nucleic bases) via a spiral representation
over triangular and square cells grids into a four-color map. The so constructed maps are then represented
by distance matrices. We consider the use of several matrix invariants as DNA descriptors for determining
the degree of similarity of a selection of DNA sequences. (doi: 10.5562/cca2338)

Keywords
DNA graphical representation; virtual genetic code; numerical representation; four color map; distance matrix of DNA; DNA similarity; DNA descriptors

Hrčak ID: 112796

URI
https://hrcak.srce.hr/112796

Visits: 882 *