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https://doi.org/10.5562/cca2338

On Map Representations of DNA

Milan Randić ; Laboratory for Chemometrics, National Institute of Chemistry, Hajdrihova 19, Ljubljana, Slovenia
Boris Horvat ; Institute of Mathematics, Physics and Mechanics, University of Ljubljana, Slovenia; University of Primorska, Koper, Slovenia; Abelium, d.o.o. Ljubljana, Slovenia
Gašper Jaklič ; Institute of Mathematics, Physics and Mechanics, University of Ljubljana, Slovenia
Dejan Plavšić ; NMR Center, Institute Rudjer Bošković, Bijenička cesta 54, Zagreb, Croatia
Tomaž Pisanski ; Institute of Mathematics, Physics and Mechanics, University of Ljubljana, Slovenia; University of Primorska, Koper, Slovenia

Puni tekst: engleski, pdf (3 MB) str. 519-529 preuzimanja: 621* citiraj
APA 6th Edition
Randić, M., Horvat, B., Jaklič, G., Plavšić, D. i Pisanski, T. (2013). On Map Representations of DNA. Croatica Chemica Acta, 86 (4), 519-529. https://doi.org/10.5562/cca2338
MLA 8th Edition
Randić, Milan, et al. "On Map Representations of DNA." Croatica Chemica Acta, vol. 86, br. 4, 2013, str. 519-529. https://doi.org/10.5562/cca2338. Citirano 17.09.2021.
Chicago 17th Edition
Randić, Milan, Boris Horvat, Gašper Jaklič, Dejan Plavšić i Tomaž Pisanski. "On Map Representations of DNA." Croatica Chemica Acta 86, br. 4 (2013): 519-529. https://doi.org/10.5562/cca2338
Harvard
Randić, M., et al. (2013). 'On Map Representations of DNA', Croatica Chemica Acta, 86(4), str. 519-529. https://doi.org/10.5562/cca2338
Vancouver
Randić M, Horvat B, Jaklič G, Plavšić D, Pisanski T. On Map Representations of DNA. Croatica Chemica Acta [Internet]. 2013 [pristupljeno 17.09.2021.];86(4):519-529. https://doi.org/10.5562/cca2338
IEEE
M. Randić, B. Horvat, G. Jaklič, D. Plavšić i T. Pisanski, "On Map Representations of DNA", Croatica Chemica Acta, vol.86, br. 4, str. 519-529, 2013. [Online]. https://doi.org/10.5562/cca2338

Sažetak
We have constructed graphical (qualitative and visual) representations of DNA sequences as 2D
maps and their numerical (quantitative and computational) analysis. The maps are obtained by transforming
the four-letter sequences (where letters represent the four nucleic bases) via a spiral representation
over triangular and square cells grids into a four-color map. The so constructed maps are then represented
by distance matrices. We consider the use of several matrix invariants as DNA descriptors for determining
the degree of similarity of a selection of DNA sequences. (doi: 10.5562/cca2338)

Ključne riječi
DNA graphical representation; virtual genetic code; numerical representation; four color map; distance matrix of DNA; DNA similarity; DNA descriptors

Hrčak ID: 112796

URI
https://hrcak.srce.hr/112796

Posjeta: 882 *