Agriculture, Vol. 21 No. 1 SUPPLEMENT, 2015.
Original scientific paper
https://doi.org/10.18047/poljo.21.1.sup.40
DEVELOPMENT OF INTEGRATED CATTLE GENOMICS KNOWLEDGE BASE
Minja Zorc
orcid.org/0000-0003-3330-7909
; University of Ljubljana, Biotechnical Faculty, Department of Animal Science, Groblje 3, 1230 Domžale, Slovenia
Tanja Kunej
; University of Ljubljana, Biotechnical Faculty, Department of Animal Science, Groblje 3, 1230 Domžale, Slovenia
Abstract
Systems biology approaches being applied to animal breeding represent an opportunity to derive greater benefits from animal production systems. The increasingly detailed investigations in systems biology have led to a large amount of data dispersed over various sources; therefore, a centralized knowledge base is in demand. In this study, we have integrated cattle genomics data of heterogeneous sources and types and developed a bioinformatics tool to study genotype-phenotype associations in cattle: http://integromics-time.com/integromics-database/. The tool enables revealing genomic overlaps within trait-associated loci and identification of potential functional candidates. It might be also used as a tool for planning genotype– phenotype research in cattle.
Keywords
breeding; bioinformatics; cattle; data integration; genomics
Hrčak ID:
150913
URI
Publication date:
2.9.2015.
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